;   MEGA-CC (Molecular Evolutionary Genetics Analysis Compute Core)
;
;   Suggested Citation for MEGA-CC 10:
;
;   Kumar S, Stecher G, Li M, Knyaz C, Tamura K (2018)
;   MEGA X: Molecular Evolutionary Genetics Analysis across computing platforms
;   Molecular Biology and Evolution (https://doi.org/10.1093/molbev/msy096)
;
;   Kumar S, Stecher G, Peterson D, and Tamura K (2012)
;   MEGA-CC: Computing Core of Molecular Evolutionary Genetics
;   Analysis Program for Automated and Iterative Data Analysis.
;   Bioinformatics (2012) 28:2685-2686 (Epub 2012 Aug 24)

[General Info]

	Data Type                               = nucleotide (non-coding)
	No. of Taxa                             =       33
	Data File                               = '/var/www/CpnClassiPhyRWebUI/CpnClassiPhyR/subgroup_metadata/phylogenetics/subgroups_tree.fasta'
	Settings File                           = '/var/www/CpnClassiPhyRWebUI/CpnClassiPhyR/config/clustalw_align.mao'
	Command Line                            = /usr/lib/megax/megacc -d /var/www/CpnClassiPhyRWebUI/CpnClassiPhyR/subgroup_metadata/phylogenetics/subgroups_tree.fasta -a /var/www/CpnClassiPhyRWebUI/CpnClassiPhyR/config/clustalw_align.mao -o /var/www/CpnClassiPhyRWebUI/CpnClassiPhyR/subgroup_metadata/phylogenetics/subgroups_clustalw_align

[Analysis Settings]

	DNAPWGapOpenPenalty                     = 15.00
	DNAPWGapExtendPenalty                   = 6.66
	DNAGapOpenPenalty                       = 15.00
	DNAGapExtendPenalty                     = 6.66
	DNAMatrix                               = 
	TransitionWeight                        = 0.50
	UseNegativeMatrix                       = True
	DivergentCutoff                         = 30
	ResetGaps                               = False

[Analysis Statistics]

	Start Time                              = 02/06/2020 08:50:44 PM
	End Time                                = 02/06/2020 08:51:01 PM
	Execution Time                          =   16.371 (seconds)
	Peak Memory Used(Working Set)           = Not available